Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009310.1 Corchorus capsularis cultivar CVL-1 contig09331, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17774

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
845--874
2
15.0
2
100
0
60
50
0
0
50
1.00
5111--5189
29
2.6
28
77
15
79
40
12
26
20
1.88
5499--5525
1
27.0
1
100
0
54
0
0
0
100
0.00
10455--10480
7
3.7
7
100
0
52
26
11
15
46
1.80
13644--13725
35
2.2
39
82
8
100
53
8
18
19
1.69
15008--15032
4
6.2
4
100
0
50
76
0
0
24
0.80

Tables:   1

The End!