Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWWV01009319.1 Corchorus capsularis cultivar CVL-1 contig09340, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 16871
ACGTcount: A:0.35, C:0.18, G:0.17, T:0.30
Found at i:2081 original size:19 final size:18
Alignment explanation
Indices: 2048--2083 Score: 54
Period size: 19 Copynumber: 1.9 Consensus size: 18
2038 TTGAAATAAT
2048 TCTTCAATGATCTTCAAA
1 TCTTCAATGATCTTCAAA
*
2066 TCTTCAAATTATCTTCAA
1 TCTTC-AATGATCTTCAA
2084 GAAATCTTCA
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
18 5 0.31
19 11 0.69
ACGTcount: A:0.33, C:0.22, G:0.03, T:0.42
Consensus pattern (18 bp):
TCTTCAATGATCTTCAAA
Found at i:7804 original size:18 final size:17
Alignment explanation
Indices: 7781--7816 Score: 54
Period size: 17 Copynumber: 2.1 Consensus size: 17
7771 CCAAAGCCCA
*
7781 CTTATTCCTTTTTCTTTT
1 CTTATT-CTTTTTCATTT
7799 CTTATTCTTTTTCATTT
1 CTTATTCTTTTTCATTT
7816 C
1 C
7817 ATTTTTTTTT
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
17 11 0.65
18 6 0.35
ACGTcount: A:0.08, C:0.22, G:0.00, T:0.69
Consensus pattern (17 bp):
CTTATTCTTTTTCATTT
Found at i:14787 original size:852 final size:852
Alignment explanation
Indices: 12316--16871 Score: 7357
Period size: 852 Copynumber: 5.4 Consensus size: 852
12306 TCAGAATTTA
* *
12316 GATACCTCCAATGGAATGCATTATAAAATATTTGTATTGGCAAATATGCATAATTCAAAATTCTG
1 GATACCTCCCATGGAATGTATTATAAAATATTTGTATTGGCAAATATGCATAATTCAAAATTCTG
* * * * *
12381 ATAAATGAAATTATTCCTTAAAGAAGAGAAACCTGAAATTTGATTATAGTCCAATTATAATGTGG
66 ATAAATGAAATTATTCCTTAAAGAAGAGACACCTGAAATTTGATTATAGTCTAATTACAATGCGA
* * *
12446 TACAAATCAATTTTCCAGACAAACACAGAAGAGGCAGAGACTTATATCCTAGCGTGTCGTTATGC
131 TACTAATCAATTTTCCAGACAAACACAGAAGAGGCAGAGACTTATTTCCTAGCGTGTCGTTTTGC
* *
12511 GAGGTGATCAACGGT-CCACCAATGCTAAGCCTGTAAATGACCTGGTAACCATATACTTCCACAA
196 GAGGTGATCAACGGTCCCA-CAATGTTAAGCCTGTAAATGACCTGGTAACCATATACTCCCACAA
* * * ** * *
12575 A-CAAGAAACACATTAATTGTGAAAAGGGTACCGGCAGATTCAACAATCAGTTAATCTGGAACTA
260 ATC-AGAAACACATTAATTCTGAAAAGAGTACTGGCAGATTCGGCAATCAGTTCATCTGGAACTG
* *
12639 AAACAACCTCAATGGCATTGATGAAAA-CAGTTGAATCCTTCATAGGAGTGAACATGATTGTAAA
324 AAACAACCTCAATGGCATTGAT-AAAAGCAGTTGAATCCTTCATAGGAGTAAACGTGATTGTAAA
* * *
12703 TGTACAATCTCGCAACTTAAGAAGATACTTCTCGAGTATTGGGTACTGATATTGTCAAGCTTGAA
388 TGTACAATCTCGCAAGTTAAGAAGATACTTCTTGAGGATTGGGTACTGATATTGTCAAGCTTGAA
* * * *
12768 GTTGTGGAGAAAAACATGCTTGTAGGCAAAGATGATAAATAATTTTTTATTAAAGATCAATCCGG
453 GTTGTGGAGCAAAACATACTTGTAGGCAAAGATGGTAAAT-ATTTTTTGTTAAAGATCAATCCGG
* *
12833 TCATTTTTCACTAGAAGAACTGGAGACGCACTCAACGAAAACCAGCCCGCTTTAATTTAAATGTG
517 TCATTTTTCACTAGAAGAAATGGAGACGCACTCAACGAAAACCAGACCGCTTTAATTTAAATGTG
* *
12898 TAGGTGACTTCTTGGGGAAAAACCAGCGTGGTTAAATATAGAGGTGAAGGAACATAGGAAGACTC
582 TAGGTGGCTTCTTGGGGAAAAACCAGCGTGGTTAAATATAGAGGTGAAGGAACATCGGAAGACTC
*
12963 TTCAAAAAGATAATATTTCAAATGGTTCAATTACAACACCAAAGAAAATGAGAGGTAAGATAAGG
647 TTCAAAAAGATAATATTTCAAATGGTTCAATTACAACACCAAAGAAAATTAGAGGTAAGATAAGG
* *
13028 CTACTTGCGAACCTGTAAAGCAACATAATAAGCCATTACTAACAAAGCAAATCTAGTAGTGTTGT
712 CTACTTGCGAACCTGTAAAGCAACATAATAAGCCATTACTGACAAAGCAAATCCAGTAGTGTTGT
* *
13093 TTCTGACCAAAATGATGATTATCTACTTCACATGTTGCAGCAGAACCAAGGCCCGAAAAATTCTT
777 TTCTGACCAAAATGATGATTATCTACTTCACATGTTGCAGCAGAACCAAGGCCCGTAACATTCTT
*
13158 CCTCACATTTC
842 CCTCACTTTTC
* * *
13169 GATACCTCCCATGGAATGTATTATAAAATATTTGTATTTGCAAATATGTATAATTAAAAATTCTG
1 GATACCTCCCATGGAATGTATTATAAAATATTTGTATTGGCAAATATGCATAATTCAAAATTCTG
**
13234 ----AT-AAATTATTCCTTAAAGAAGAGACACCTGAAATTTGATTATAGTCTAATTACAATGTTA
66 ATAAATGAAATTATTCCTTAAAGAAGAGACACCTGAAATTTGATTATAGTCTAATTACAATGCGA
13294 TACTAATCAATTTTCCAGACAAACACAGAAGAGGCAGAGACTTATTTCCTAGCGTGTCGTTTTGC
131 TACTAATCAATTTTCCAGACAAACACAGAAGAGGCAGAGACTTATTTCCTAGCGTGTCGTTTTGC
* * * *
13359 GAGGTGATCAACGGTCCCCCCATGTTAAGCCTGAAAATGACCTGGTAACCATATACTTCCACAAA
196 GAGGTGATCAACGGTCCCACAATGTTAAGCCTGTAAATGACCTGGTAACCATATACTCCCACAAA
* * * * *
13424 TCAGAAAAACATTAATTGTGAAAAGGGTACTGGCGGATTCTGCAATCAGTTCATCTGG-ACTGAA
261 TCAGAAACACATTAATTCTGAAAAGAGTACTGGCAGATTCGGCAATCAGTTCATCTGGAACTGAA
* *
13488 ACAACCTCAATGGCATTAATGAAAGCAGTTGAATCCTTCATAGGAGTAAACGTGATTGTAAATGT
326 ACAACCTCAATGGCATTGATAAAAGCAGTTGAATCCTTCATAGGAGTAAACGTGATTGTAAATGT
13553 ACAATCTCGCAAGTTAAGAAGATACTTCTTGAGGATTGGGTACTGATATTGTCAAGCTTGAAGTT
391 ACAATCTCGCAAGTTAAGAAGATACTTCTTGAGGATTGGGTACTGATATTGTCAAGCTTGAAGTT
*
13618 GTGGAGCAAAACATACTTGTAGGCAAAGATGGTAAATATTTTTTTGTTAAAGATCAATTCGGTCA
456 GTGGAGCAAAACATACTTGTAGGCAAAGATGGTAAATA-TTTTTTGTTAAAGATCAATCCGGTCA
* * *
13683 TTTTTCACTAGAAGAAATGGAGACGAACTCAACAAAAACCATACCGCTTTAATTTAAATGTGTAG
520 TTTTTCACTAGAAGAAATGGAGACGCACTCAACGAAAACCAGACCGCTTTAATTTAAATGTGTAG
*
13748 GTGGCTTCTTGGGGAAAAACCAGCGTGGTTAAATATAGAGGTGAAGGAACATTGGAAGACTCTTC
585 GTGGCTTCTTGGGGAAAAACCAGCGTGGTTAAATATAGAGGTGAAGGAACATCGGAAGACTCTTC
*
13813 AAAAAGATAATATTTCAAATGGTTCAATTACAATACCAAAGAAAATTAGAGGTAAGATAAGGCTA
650 AAAAAGATAATATTTCAAATGGTTCAATTACAACACCAAAGAAAATTAGAGGTAAGATAAGGCTA
* *
13878 CTTGCGAACTTGTAAAGCAACATAATAAGGCATTACTGACAAAGCAAATCCAGTAGTGTTGTTTC
715 CTTGCGAACCTGTAAAGCAACATAATAAGCCATTACTGACAAAGCAAATCCAGTAGTGTTGTTTC
* *
13943 TGACCAAAATGATGATTATCTACTACACATGTTGCAGCAGAACCAAGGCTCGTAACATTCTTCCT
780 TGACCAAAATGATGATTATCTACTTCACATGTTGCAGCAGAACCAAGGCCCGTAACATTCTTCCT
14008 CACTTTTC
845 CACTTTTC
*
14016 GATACCTCCCATGGAATGTATTATAAAATATTTGTATTGGCAAATATGCATAATTCAAAATTCTA
1 GATACCTCCCATGGAATGTATTATAAAATATTTGTATTGGCAAATATGCATAATTCAAAATTCTG
* *
14081 ATAAATGAAATTAATCATTAAAGAAGAGACA-CTAGAAATTTGATTATAGTCTAATTACAATGCG
66 ATAAATGAAATTATTCCTTAAAGAAGAGACACCT-GAAATTTGATTATAGTCTAATTACAATGCG
* * * *
14145 ATACTAATAAATTTTCCGGACAAACACAGAAGGGGCAGAGACTTATTTTCTAGCGTGTCGTTTTG
130 ATACTAATCAATTTTCCAGACAAACACAGAAGAGGCAGAGACTTATTTCCTAGCGTGTCGTTTTG
*
14210 CGAGGTGATCAACGGTCCCACAATGTTAAGCCTGTAAATGACCTGGTAAGCATATACTCCCACAA
195 CGAGGTGATCAACGGTCCCACAATGTTAAGCCTGTAAATGACCTGGTAACCATATACTCCCACAA
* * *
14275 ATCAGAAACACATTGATTCTTAAAAGAGTACTGGCAGATTTGGCAATCAGTTCATCTGGAACTGA
260 ATCAGAAACACATTAATTCTGAAAAGAGTACTGGCAGATTCGGCAATCAGTTCATCTGGAACTGA
* *
14340 AACAACCTCATTGGCATTGATAAAACCAGTTGAATCCTTCATAGGAGTAAACGTGATTGTAAATG
325 AACAACCTCAATGGCATTGATAAAAGCAGTTGAATCCTTCATAGGAGTAAACGTGATTGTAAATG
14405 TACAATCTCGCAAGTTAAGAAGATACTTCTTGAGGATTGGGTACTGATATTGTCAAGCTTGAAGT
390 TACAATCTCGCAAGTTAAGAAGATACTTCTTGAGGATTGGGTACTGATATTGTCAAGCTTGAAGT
14470 TGTGGAGCAAAACATACTTGTAGGCAAAGATGGTAAATATTTTTTTGTTAAAGATCAATCCGGTC
455 TGTGGAGCAAAACATACTTGTAGGCAAAGATGGTAAATA-TTTTTTGTTAAAGATCAATCCGGTC
** * * *
14535 ATTTTTCTGTAGAAGAAATGGAGAGGCACTCAACGTAAACAAGACCGCTTTAATTTAAATGTGTA
519 ATTTTTCACTAGAAGAAATGGAGACGCACTCAACGAAAACCAGACCGCTTTAATTTAAATGTGTA
**
14600 GGTGGCTTCTTGGGGAAAATTCAGCGTGGTTAAATATAGAGGTGAAGGAACATCGGAAGACTCTT
584 GGTGGCTTCTTGGGGAAAAACCAGCGTGGTTAAATATAGAGGTGAAGGAACATCGGAAGACTCTT
*
14665 C-AAAAGATAATATTTCAAATGGTTCAATTACAACACCAAAGAAAATTAGAGATAAGATAAGGCT
649 CAAAAAGATAATATTTCAAATGGTTCAATTACAACACCAAAGAAAATTAGAGGTAAGATAAGGCT
* * *
14729 ACTTGCGAACCTGTAAAGCAACATAATAAGCCATTACTGACAGAGCAAATCTAGTAGTGTGGTTT
714 ACTTGCGAACCTGTAAAGCAACATAATAAGCCATTACTGACAAAGCAAATCCAGTAGTGTTGTTT
* * * * * *
14794 CTGACCAAAATGATAATTATCTCCTTCACATGTTGCAGCAGAAGCAAGACCCATAACATTCATCC
779 CTGACCAAAATGATGATTATCTACTTCACATGTTGCAGCAGAACCAAGGCCCGTAACATTCTTCC
14859 TCACTTTTC
844 TCACTTTTC
*
14868 GATACCTCCCATGGAATGTATTATAAAATATTTGTATTTGCAAATATGCATAATTCAAAATTCTG
1 GATACCTCCCATGGAATGTATTATAAAATATTTGTATTGGCAAATATGCATAATTCAAAATTCTG
* * *
14933 ATAAATGAAATTATTCCTTAAAGAAGAAACACCTGAAATTTGATTATAGTTTAATTACAATGGGA
66 ATAAATGAAATTATTCCTTAAAGAAGAGACACCTGAAATTTGATTATAGTCTAATTACAATGCGA
* * * * *
14998 TACTAATCAATTTGCCAGACAAACAGAGAAGAGGCAGGGATTTATTTCCTAGCGTGTCGTTTAGC
131 TACTAATCAATTTTCCAGACAAACACAGAAGAGGCAGAGACTTATTTCCTAGCGTGTCGTTTTGC
* *
15063 GAGGTGAGCAATGGTCCCACAATGTTAAGCCTGTAAATGACCTGGTAACCATATACTCCCACAAA
196 GAGGTGATCAACGGTCCCACAATGTTAAGCCTGTAAATGACCTGGTAACCATATACTCCCACAAA
* * *
15128 TCAGAAACACATTAATTTCTGAAAAGAGTACTGGC-GAATTCGTCAATCAGTTCATCTAGAGCTG
261 TCAGAAACACATTAA-TTCTGAAAAGAGTACTGGCAG-ATTCGGCAATCAGTTCATCTGGAACTG
* * *
15192 AAATAACATCAATGGCATTGAT-GAAGCAGTTGAATCCTTCATAGGAGTAAACGTGATTGTAAAT
324 AAACAACCTCAATGGCATTGATAAAAGCAGTTGAATCCTTCATAGGAGTAAACGTGATTGTAAAT
* *
15256 GTACAATCTTGCAAGTTAAGAGGATACTTCTTGAGGATTGGGTACTGATATTGTCAAGCTTGAAG
389 GTACAATCTCGCAAGTTAAGAAGATACTTCTTGAGGATTGGGTACTGATATTGTCAAGCTTGAAG
* * *
15321 TTATGGACCAAAACATACTTGTAGGCAAAGATGGTAAATATTTTTTGTTAAAGATCAATCCAGTC
454 TTGTGGAGCAAAACATACTTGTAGGCAAAGATGGTAAATATTTTTTGTTAAAGATCAATCCGGTC
*
15386 ATTTTTCACTAGAAGAAATGGAGACGCACTCAACGAAAATCAGACCGCTTTAATTTAAATGTGTA
519 ATTTTTCACTAGAAGAAATGGAGACGCACTCAACGAAAACCAGACCGCTTTAATTTAAATGTGTA
* * *
15451 GGTGGCTTCTTCGGGAAAAACCAGTGTGGTTAAATATA-AGGGTTAAGGAACATCGGAAGACTCT
584 GGTGGCTTCTTGGGGAAAAACCAGCGTGGTTAAATATAGA-GGTGAAGGAACATCGGAAGACTCT
* *
15515 TCAAAAAGATAATATTTCAAATGGTTCAATTACAACACCAAAGAAAGTTAGAGTTAAGATAAGGC
648 TCAAAAAGATAATATTTCAAATGGTTCAATTACAACACCAAAGAAAATTAGAGGTAAGATAAGGC
15580 TACTTGCGAACCTGTAAAGCAACATAATAAGCCATTACTGACAAAGCAAATCCAGTAGTGTTGTT
713 TACTTGCGAACCTGTAAAGCAACATAATAAGCCATTACTGACAAAGCAAATCCAGTAGTGTTGTT
* *
15645 TCTGACCAAAATGATGATTATCTACTTCACATGTTGCAGCATAACAAAGGCCCGTAACATTCTTC
778 TCTGACCAAAATGATGATTATCTACTTCACATGTTGCAGCAGAACCAAGGCCCGTAACATTCTTC
15710 CTCACTTTTC
843 CTCACTTTTC
*
15720 GATACCTCCCATGGAATTTATTATAAAATATTTGTATTGGCAAATATGCATAATTCAAAATTCTG
1 GATACCTCCCATGGAATGTATTATAAAATATTTGTATTGGCAAATATGCATAATTCAAAATTCTG
*
15785 ATAAATGAAATTATTCCTTAAAGAAGAGACACTTGAAATTTGATTATAGTCTAATTACAATGCGA
66 ATAAATGAAATTATTCCTTAAAGAAGAGACACCTGAAATTTGATTATAGTCTAATTACAATGCGA
* *
15850 TACTAATCAATTTTCCAAACAAACACAGAAGAGGCAGAGACTTATTTCCTAGTGTGTCGTTTTGC
131 TACTAATCAATTTTCCAGACAAACACAGAAGAGGCAGAGACTTATTTCCTAGCGTGTCGTTTTGC
* * *
15915 GAGGTGATCAACGGTCCCCCCATGTTAAGCCTGTAAATGACCTGGTAACCATATACTTCCACAAA
196 GAGGTGATCAACGGTCCCACAATGTTAAGCCTGTAAATGACCTGGTAACCATATACTCCCACAAA
* * * *
15980 T-ATGAAACACATTAATTGTGAAAAGGGTACTGGCGGATTCGGCAATCAGTTCATCTGTAACTGA
261 TCA-GAAACACATTAATTCTGAAAAGAGTACTGGCAGATTCGGCAATCAGTTCATCTGGAACTGA
* *
16044 AACAACCGCAATGGCATTGATGAAAGCAGTTGAATCCTTCATAGGAGTAAACGTGATTGTAAATG
325 AACAACCTCAATGGCATTGATAAAAGCAGTTGAATCCTTCATAGGAGTAAACGTGATTGTAAATG
*
16109 TACAATCTCGCAAGTTAAGAAGATACTTCTTGAGGATTGGGTACTGATATTGTCAATCTTGAAGT
390 TACAATCTCGCAAGTTAAGAAGATACTTCTTGAGGATTGGGTACTGATATTGTCAAGCTTGAAGT
* * * *
16174 TGTGGAGCAAAACATACTTGTAGGTAATGATGATAAATATTTTTTGTTAAAGATAAATCCGGTCA
455 TGTGGAGCAAAACATACTTGTAGGCAAAGATGGTAAATATTTTTTGTTAAAGATCAATCCGGTCA
* *
16239 TTTTTCACTAGAAGAAATGGAGACGCACTCAACAAAAACCATACCGCTTTAATTTAAATGTGTAG
520 TTTTTCACTAGAAGAAATGGAGACGCACTCAACGAAAACCAGACCGCTTTAATTTAAATGTGTAG
* *
16304 GTGGCTTCTTGGGGAAAAACCAGCGTGGTTAAATATAGAGGTGAAGGAGCATTGGAAGACTCTTC
585 GTGGCTTCTTGGGGAAAAACCAGCGTGGTTAAATATAGAGGTGAAGGAACATCGGAAGACTCTTC
*
16369 AAAAAGATAATATTTCAAATGGTTCAATTACAACACCAAAGAAAATTAGAGGTAAGATATGGCTA
650 AAAAAGATAATATTTCAAATGGTTCAATTACAACACCAAAGAAAATTAGAGGTAAGATAAGGCTA
* *
16434 CTTGCGAACCTGTAAATCAACTTAATAAGCCATTACTGACAAAGCAAATCCAGTAGTGTTGTTTC
715 CTTGCGAACCTGTAAAGCAACATAATAAGCCATTACTGACAAAGCAAATCCAGTAGTGTTGTTTC
* *
16499 TGACCAAAATGATGAATATCTACTACACATGTTGCAGCAGAACCAAGGCCCGTAACATTCTTCCT
780 TGACCAAAATGATGATTATCTACTTCACATGTTGCAGCAGAACCAAGGCCCGTAACATTCTTCCT
16564 CACTTTTC
845 CACTTTTC
* *
16572 GATA----CC-T---A---ATT-CAAAATATTTGAATTGGCAAATATGCATAATTCAAAATTCTG
1 GATACCTCCCATGGAATGTATTATAAAATATTTGTATTGGCAAATATGCATAATTCAAAATTCTG
* * *
16625 ATAAATGAAATTAATCCTTAAAGAAGAGACACCAGAAATTTGACTATAGTCTAATTACAATGCGA
66 ATAAATGAAATTATTCCTTAAAGAAGAGACACCTGAAATTTGATTATAGTCTAATTACAATGCGA
* * *
16690 AACTAATAAATTATCCAGACAAACACAGAAGAGGCAGAGACTTATTTCCTAGCGTGTCGTTTTGC
131 TACTAATCAATTTTCCAGACAAACACAGAAGAGGCAGAGACTTATTTCCTAGCGTGTCGTTTTGC
*
16755 GAGGTGATCAACGGTCCCACAATGTTAAGCCTGTAAATGACCTGGTAAGCATATACTCCCACAAA
196 GAGGTGATCAACGGTCCCACAATGTTAAGCCTGTAAATGACCTGGTAACCATATACTCCCACAAA
* * *
16820 TCAGAAACACATTGATTCTTAAAAGAGTACTAGCAGATTCGGCAATCAGTTC
261 TCAGAAACACATTAATTCTGAAAAGAGTACTGGCAGATTCGGCAATCAGTTC
Statistics
Matches: 3437, Mismatches: 245, Indels: 55
0.92 0.07 0.01
Matches are distributed among these distances:
840 266 0.08
841 4 0.00
844 1 0.00
846 4 0.00
847 559 0.16
848 225 0.07
849 5 0.00
850 1 0.00
851 206 0.06
852 1728 0.50
853 438 0.13
ACGTcount: A:0.36, C:0.17, G:0.18, T:0.28
Consensus pattern (852 bp):
GATACCTCCCATGGAATGTATTATAAAATATTTGTATTGGCAAATATGCATAATTCAAAATTCTG
ATAAATGAAATTATTCCTTAAAGAAGAGACACCTGAAATTTGATTATAGTCTAATTACAATGCGA
TACTAATCAATTTTCCAGACAAACACAGAAGAGGCAGAGACTTATTTCCTAGCGTGTCGTTTTGC
GAGGTGATCAACGGTCCCACAATGTTAAGCCTGTAAATGACCTGGTAACCATATACTCCCACAAA
TCAGAAACACATTAATTCTGAAAAGAGTACTGGCAGATTCGGCAATCAGTTCATCTGGAACTGAA
ACAACCTCAATGGCATTGATAAAAGCAGTTGAATCCTTCATAGGAGTAAACGTGATTGTAAATGT
ACAATCTCGCAAGTTAAGAAGATACTTCTTGAGGATTGGGTACTGATATTGTCAAGCTTGAAGTT
GTGGAGCAAAACATACTTGTAGGCAAAGATGGTAAATATTTTTTGTTAAAGATCAATCCGGTCAT
TTTTCACTAGAAGAAATGGAGACGCACTCAACGAAAACCAGACCGCTTTAATTTAAATGTGTAGG
TGGCTTCTTGGGGAAAAACCAGCGTGGTTAAATATAGAGGTGAAGGAACATCGGAAGACTCTTCA
AAAAGATAATATTTCAAATGGTTCAATTACAACACCAAAGAAAATTAGAGGTAAGATAAGGCTAC
TTGCGAACCTGTAAAGCAACATAATAAGCCATTACTGACAAAGCAAATCCAGTAGTGTTGTTTCT
GACCAAAATGATGATTATCTACTTCACATGTTGCAGCAGAACCAAGGCCCGTAACATTCTTCCTC
ACTTTTC
Done.