Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009324.1 Corchorus capsularis cultivar CVL-1 contig09345, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43670

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2218--2589
205
1.8
204
91
1
620
28
18
17
35
1.94
6202--6228
2
13.5
2
100
0
54
48
0
0
51
1.00
18548--18576
15
2.0
15
93
6
51
17
20
0
62
1.33
32264--32290
6
4.5
6
100
0
54
0
14
0
85
0.61
36282--36316
16
2.2
16
94
0
61
45
14
25
14
1.82
39300--39342
16
2.7
16
100
0
86
9
25
16
48
1.75
41435--41491
28
2.0
28
100
0
114
38
3
17
40
1.67
42516--42824
153
2.0
154
93
1
532
33
9
14
42
1.78
42934--42990
28
2.1
27
84
15
73
56
7
8
28
1.56
43040--43088
21
2.3
20
80
10
53
44
8
12
34
1.71
43547--43577
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!