Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009326.1 Corchorus capsularis cultivar CVL-1 contig09347, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13058

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25--56
2
16.0
2
100
0
64
50
0
0
50
1.00
1015--1860
334
2.5
329
80
8
944
34
12
15
38
1.84
1015--1860
331
2.5
329
80
8
962
34
12
15
38
1.84
1954--1997
14
3.0
15
90
6
56
54
6
9
29
1.58
1967--1997
14
2.2
14
100
0
62
58
9
6
25
1.54
1981--2295
140
2.2
140
97
0
594
42
4
17
34
1.71

Tables:   1

The End!