Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009327.1 Corchorus capsularis cultivar CVL-1 contig09348, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17566

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4771--4806
19
1.9
18
88
5
54
41
2
22
33
1.68
6461--6513
21
2.6
21
87
3
72
7
32
32
28
1.85
9155--9191
19
1.9
19
89
10
58
51
5
8
35
1.55
14171--14248
24
3.2
24
62
13
59
37
16
11
34
1.85
14164--14264
50
2.0
50
98
0
193
34
15
12
36
1.86
15706--15760
12
4.5
12
88
4
83
27
21
16
34
1.95
15706--15760
25
2.2
24
93
3
92
27
21
16
34
1.95

Tables:   1

The End!