Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009335.1 Corchorus capsularis cultivar CVL-1 contig09356, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16637

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1293--1328
18
2.0
18
94
0
63
55
19
0
25
1.43
5974--6029
2
28.5
2
85
3
69
46
1
3
48
1.30
6093--6148
18
3.1
18
77
7
60
51
3
1
42
1.29
10834--10859
2
13.0
2
100
0
52
50
0
0
50
1.00
11451--11524
30
2.5
30
82
8
80
18
18
21
40
1.91
14063--14219
74
2.1
74
92
2
262
21
29
8
40
1.83

Tables:   1

The End!