Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009336.1 Corchorus capsularis cultivar CVL-1 contig09357, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13348

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
428--485
29
2.0
29
96
0
107
20
15
29
34
1.94
1080--1131
24
2.2
24
96
0
95
17
38
28
15
1.90
1407--1498
36
2.6
36
87
0
139
22
23
34
18
1.96
6015--6100
45
1.9
45
92
0
145
25
17
25
31
1.97
6132--6211
31
2.5
31
93
2
133
18
11
35
35
1.87

Tables:   1

The End!