Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009338.1 Corchorus capsularis cultivar CVL-1 contig09359, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26857

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
161--198
2
19.5
2
94
5
69
50
0
0
50
1.00
3507--3570
27
2.3
27
97
2
119
54
7
31
6
1.54
4076--4951
444
2.0
447
84
3
1174
42
12
13
31
1.82
19617--19669
25
2.2
25
86
6
74
22
7
3
66
1.34
22131--22324
104
1.9
104
94
0
343
33
17
18
30
1.94
26661--26699
11
3.5
11
79
6
51
33
10
10
46
1.72

Tables:   1

The End!