Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000934.1 Corchorus capsularis cultivar CVL-1 contig00934, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3570

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1495--1584
12
7.5
11
84
13
76
46
3
33
16
1.64
1501--1586
30
2.9
30
98
0
154
47
2
33
16
1.59
1456--1570
18
6.7
18
77
16
127
44
3
36
15
1.64
3285--3329
2
22.0
2
95
4
81
48
2
0
48
1.13
3469--3511
11
3.9
11
90
0
68
46
6
4
41
1.51
3465--3511
22
2.1
22
96
0
85
46
6
4
42
1.48

Tables:   1

The End!