Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009341.1 Corchorus capsularis cultivar CVL-1 contig09362, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14934

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--39
2
19.5
2
100
0
78
51
0
0
48
1.00
3928--3988
32
1.9
32
89
0
95
34
9
27
27
1.89
4511--4542
16
2.0
16
93
0
55
21
12
21
43
1.86
4519--4562
16
2.8
16
85
0
52
25
20
20
34
1.97
4972--5025
27
2.0
27
88
0
81
33
27
11
27
1.91
5461--5510
26
1.9
26
91
0
82
28
10
30
32
1.89
12914--12945
16
2.0
16
93
0
55
9
21
6
62
1.47
13611--13639
14
2.0
15
93
6
51
48
6
3
41
1.47
14744--14788
21
2.1
21
87
0
63
35
8
37
17
1.81

Tables:   1

The End!