Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009344.1 Corchorus capsularis cultivar CVL-1 contig09365, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30046

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--86
34
2.6
32
84
14
113
13
33
38
13
1.85
1--73
34
2.2
34
90
9
116
15
35
36
12
1.84
1361--1437
38
2.0
38
100
0
154
37
20
7
33
1.82
14046--14103
18
3.2
18
85
0
80
12
43
22
22
1.86
21671--21700
7
4.4
7
95
4
53
0
10
0
90
0.47
26377--26427
24
2.1
24
92
0
84
27
7
3
60
1.42
26706--26781
40
1.9
40
91
0
125
34
10
13
42
1.78
28635--28675
18
2.3
18
91
4
66
39
2
0
58
1.11
28635--28668
9
3.8
9
84
0
50
41
2
0
55
1.15

Tables:   1

The End!