Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009345.1 Corchorus capsularis cultivar CVL-1 contig09366, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66074

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
582--628
21
2.2
21
96
0
85
23
4
36
36
1.75
1208--1232
2
12.5
2
100
0
50
48
0
0
52
1.00
4016--4057
18
2.3
18
87
0
57
42
2
2
52
1.27
5302--5395
3
31.3
3
73
14
70
58
1
3
37
1.21
10015--10095
36
2.2
36
97
0
153
39
16
13
30
1.87
12188--12216
6
4.8
6
100
0
58
0
17
31
51
1.45
20190--20244
24
2.4
22
75
21
58
41
7
0
50
1.30
20523--20581
27
2.1
27
81
9
66
33
11
1
52
1.48
20536--20588
27
2.0
27
82
7
65
39
7
1
50
1.41
20660--20709
26
2.0
26
88
4
75
36
8
2
54
1.42
24302--24376
31
2.5
31
84
2
98
33
17
20
29
1.95
28999--29044
23
2.0
24
86
4
67
21
15
26
36
1.93
42526--42821
135
2.2
135
89
0
441
27
26
26
20
1.99
47230--47599
156
2.4
156
80
7
403
31
14
18
35
1.92
54654--54731
39
2.0
39
97
0
147
28
14
15
42
1.85
59376--59434
24
2.5
23
81
13
66
32
0
1
66
1.02
64912--64947
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!