Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009355.1 Corchorus capsularis cultivar CVL-1 contig09376, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12305

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--233
22
10.3
21
75
13
168
55
5
20
18
1.63
16--324
43
7.0
42
75
12
250
55
5
18
19
1.62
208--272
29
2.2
29
83
0
85
61
6
16
15
1.53
237--313
22
3.6
22
77
10
88
54
5
18
22
1.63
237--326
22
4.2
21
74
20
80
56
5
15
22
1.60
2639--2697
30
2.0
30
93
0
100
32
16
6
44
1.74
6246--6279
16
2.1
16
100
0
68
32
38
5
23
1.79
6551--6640
16
5.6
15
72
11
63
50
32
12
5
1.63
6551--6640
17
5.6
16
75
6
83
50
32
12
5
1.63
9641--9720
31
2.5
31
74
7
81
40
25
13
21
1.90
9999--10058
30
2.0
30
83
0
75
70
6
10
13
1.34
10379--10410
13
2.5
13
100
0
64
43
0
0
56
0.99
10407--10457
20
2.5
21
80
6
68
25
3
13
56
1.54

Tables:   1

The End!