Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009363.1 Corchorus capsularis cultivar CVL-1 contig09384, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28471

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6303--6368
30
2.2
29
89
7
98
30
10
12
46
1.75
17705--17731
13
2.1
13
100
0
54
29
0
7
62
1.22
17829--17942
44
2.7
44
88
6
157
45
7
15
31
1.73
19233--19271
15
2.6
15
87
0
51
17
33
0
48
1.48
26893--27011
37
3.3
36
74
11
118
27
18
7
46
1.76
26863--27013
71
2.1
71
91
0
239
27
17
7
47
1.76
27068--27161
38
2.4
39
80
3
100
22
21
7
48
1.74

Tables:   1

The End!