Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009370.1 Corchorus capsularis cultivar CVL-1 contig09391, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10204

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
350--383
7
4.9
7
85
0
50
41
2
0
55
1.15
1258--1301
9
4.9
9
85
0
61
43
4
11
40
1.61
1917--1987
36
1.9
37
83
8
92
15
40
12
30
1.85
1943--1987
18
2.5
17
79
10
54
13
44
8
33
1.75
2120--2169
18
2.8
18
78
0
55
56
12
0
32
1.36
2278--2338
21
3.0
20
79
13
70
54
4
1
39
1.32
3802--3952
78
1.9
78
84
10
200
37
13
11
37
1.81
3983--4145
74
2.2
74
94
0
290
30
23
22
23
1.99
9881--9905
2
12.5
2
100
0
50
0
48
0
52
1.00
9907--9931
3
8.3
3
100
0
50
0
32
0
68
0.90

Tables:   1

The End!