Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009374.1 Corchorus capsularis cultivar CVL-1 contig09395, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12049

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3856--3888
17
1.9
17
100
0
66
30
15
24
30
1.95
4016--4087
3
23.3
3
88
5
108
34
2
0
62
1.10
6228--6265
3
12.3
3
94
5
67
34
0
0
65
0.93
6228--6308
29
3.0
25
69
22
56
32
2
4
60
1.31
8533--8760
126
1.8
126
92
0
384
15
27
27
29
1.96
10808--10929
26
4.7
26
80
8
140
18
13
38
29
1.89
10808--10929
53
2.3
52
87
4
174
18
13
38
29
1.89
10970--10999
15
2.0
15
93
0
51
10
26
50
13
1.73

Tables:   1

The End!