Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009375.1 Corchorus capsularis cultivar CVL-1 contig09396, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27356

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3628--3717
27
3.3
27
76
16
80
42
2
2
53
1.25
3665--3717
27
1.9
27
92
3
88
47
0
0
52
1.00
8131--8174
16
2.9
15
90
6
63
40
6
2
50
1.42
9017--9053
2
18.5
2
100
0
74
51
48
0
0
1.00
9472--9541
35
2.0
35
88
0
104
25
28
18
27
1.98
11323--11889
282
2.0
282
99
0
1125
25
15
28
30
1.96
19123--19212
45
2.0
46
84
2
119
26
10
21
42
1.84
24409--24438
11
2.7
11
94
0
51
10
10
0
80
0.92

Tables:   1

The End!