Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009377.1 Corchorus capsularis cultivar CVL-1 contig09398, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35734

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11465--12036
156
3.7
154
80
6
661
30
14
21
33
1.93
11487--12090
310
1.9
309
84
5
770
30
15
21
33
1.94
13520--13586
31
2.2
31
89
5
102
47
10
19
22
1.79
13697--13834
31
4.5
30
81
3
125
32
16
12
38
1.86
14790--14821
12
2.7
12
95
0
55
50
0
6
43
1.27
14861--14941
31
2.6
30
88
9
110
40
8
13
37
1.75
15059--15125
31
2.2
31
89
5
102
19
20
11
47
1.81
19275--19337
23
2.7
23
95
0
108
22
7
11
58
1.58
28533--28599
33
2.0
33
91
0
107
17
22
22
37
1.94
31649--31683
2
17.5
2
100
0
70
51
0
0
48
1.00
35067--35578
22
23.5
22
67
16
169
35
15
9
39
1.80
35134--35234
43
2.3
43
81
5
105
32
16
10
39
1.84
35348--35434
25
3.7
23
79
13
88
39
11
6
42
1.68
35401--35473
38
1.9
38
85
0
101
35
15
6
42
1.73

Tables:   1

The End!