Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009380.1 Corchorus capsularis cultivar CVL-1 contig09401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37609

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
667--724
29
2.0
30
89
3
91
34
15
31
18
1.93
14539--14813
138
2.0
138
94
0
487
40
16
15
28
1.89
19704--19736
16
2.0
17
88
5
50
39
9
6
45
1.61
21988--22014
7
3.9
7
100
0
54
0
0
14
85
0.61
25872--26404
177
3.0
178
98
0
1025
28
19
18
34
1.95
26553--26647
33
2.9
33
95
3
165
21
33
18
26
1.96

Tables:   1

The End!