Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009384.1 Corchorus capsularis cultivar CVL-1 contig09405, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11753

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
216--241
11
2.4
11
100
0
52
42
23
15
19
1.89
227--1972
331
5.3
329
90
3
2678
36
16
15
31
1.90
2164--2197
3
11.3
3
100
0
68
67
0
0
32
0.91
2194--2240
5
9.8
5
78
17
55
59
2
14
23
1.46
2195--2239
23
2.0
23
91
8
74
57
2
15
24
1.49
7645--7780
70
2.0
67
85
7
184
25
13
13
48
1.78

Tables:   1

The End!