Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009391.1 Corchorus capsularis cultivar CVL-1 contig09412, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40410

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3976--4009
8
4.1
8
85
7
50
23
2
14
58
1.50
4977--5083
33
3.2
33
85
2
117
8
28
39
23
1.84
10106--10151
22
2.1
22
87
0
65
26
28
23
21
1.99
10497--10535
10
3.9
10
89
0
60
43
20
5
30
1.73
10497--10535
20
2.0
20
100
0
78
43
20
5
30
1.73
11538--11568
13
2.5
12
94
5
53
25
22
16
35
1.94
12130--12524
220
1.8
212
91
4
646
33
12
16
37
1.86
24679--24707
12
2.4
12
100
0
58
34
13
0
51
1.42
34815--34857
12
3.6
12
77
0
50
18
32
34
13
1.90
34835--34915
42
1.9
42
89
0
126
22
41
27
8
1.82
35924--35953
8
3.6
8
95
4
51
86
0
0
13
0.57

Tables:   1

The End!