Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009392.1 Corchorus capsularis cultivar CVL-1 contig09413, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14544

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3170--3208
20
1.9
21
84
5
53
56
2
20
20
1.54
3982--4126
38
3.7
39
85
6
188
36
18
17
27
1.93
3982--4126
78
1.9
78
86
5
213
36
18
17
27
1.93
4162--4336
39
4.6
39
71
8
153
31
18
17
32
1.94
4364--4473
34
3.2
34
94
0
193
36
22
0
40
1.61
4391--4530
57
2.4
57
87
3
208
36
22
1
40
1.63
4468--4566
34
2.9
34
92
3
162
35
22
3
39
1.69
4377--4596
91
2.4
92
93
1
361
34
22
2
40
1.69
4377--4585
23
9.1
23
70
22
136
34
22
2
40
1.69
6846--6884
11
3.5
11
89
6
53
79
2
0
17
0.84
8394--8477
33
2.5
32
75
7
87
23
10
21
44
1.84
8493--8598
33
3.2
33
91
1
169
27
7
18
46
1.76
11458--11497
12
3.3
12
82
0
53
30
25
32
12
1.92

Tables:   1

The End!