Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009394.1 Corchorus capsularis cultivar CVL-1 contig09415, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3997

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
434--489
12
4.9
12
75
18
57
75
0
0
25
0.81
430--490
9
6.9
9
78
10
54
75
0
0
24
0.80
430--490
21
2.9
21
80
11
72
75
0
0
24
0.80
430--491
23
2.8
22
81
11
74
74
0
0
25
0.82
430--490
14
4.3
14
76
15
63
75
0
0
24
0.80
3300--3334
2
17.5
2
100
0
70
51
0
0
48
1.00

Tables:   1

The End!