Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009407.1 Corchorus capsularis cultivar CVL-1 contig09428, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29499

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2779--2813
18
1.9
18
100
0
70
28
22
20
28
1.98
2558--2869
152
2.0
157
85
4
420
31
16
15
36
1.90
11945--11985
19
2.2
19
100
0
82
36
0
14
48
1.44
20926--20973
23
2.1
23
100
0
96
31
12
4
52
1.58
26105--26134
2
15.0
2
100
0
60
50
0
0
50
1.00
27570--27621
25
2.0
24
85
10
68
36
7
1
53
1.41

Tables:   1

The End!