Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009409.1 Corchorus capsularis cultivar CVL-1 contig09430, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28188

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42--84
17
2.6
16
82
10
50
20
25
18
34
1.96
909--933
1
25.0
1
100
0
50
100
0
0
0
0.00
952--1024
32
2.2
33
79
13
89
10
34
35
19
1.87
16255--16444
75
2.5
76
90
5
296
34
17
6
41
1.76
16447--16473
6
4.5
6
100
0
54
14
0
0
85
0.61
18818--18850
14
2.5
14
90
9
52
33
30
15
21
1.94
21355--21416
25
2.5
24
94
5
106
58
0
9
32
1.31
22362--22454
44
2.2
42
88
5
134
36
6
19
37
1.77
23251--23284
3
11.3
3
100
0
68
67
0
0
32
0.91

Tables:   1

The End!