Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009410.1 Corchorus capsularis cultivar CVL-1 contig09431, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23767

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
155--183
3
9.7
3
100
0
58
65
0
0
34
0.93
182--226
3
15.0
3
100
0
90
33
0
0
66
0.92
12289--12326
12
3.1
12
92
3
58
50
31
2
15
1.58
12929--12979
2
25.5
2
100
0
102
49
0
0
50
1.00
13538--13568
12
2.7
12
95
5
55
64
0
19
16
1.29
15538--15572
7
5.0
7
96
0
61
40
14
28
17
1.88
17107--17243
63
2.2
63
85
2
177
20
26
16
36
1.94
18848--18886
5
7.8
5
100
0
78
58
0
0
41
0.98
22435--22654
111
2.0
111
92
0
368
28
24
22
25
1.99

Tables:   1

The End!