Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009414.1 Corchorus capsularis cultivar CVL-1 contig09435, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15677

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
314--339
13
2.0
13
100
0
52
53
0
0
46
1.00
311--359
19
2.5
20
83
10
64
46
0
6
46
1.27
301--342
2
21.5
2
85
4
59
47
0
4
47
1.23
14985--15073
16
5.6
16
86
7
137
5
13
39
41
1.68
15031--15122
6
14.5
6
72
18
62
4
17
44
33
1.68
14985--15073
31
2.8
32
89
1
144
5
13
39
41
1.68
14985--15091
48
2.2
48
83
9
130
5
14
40
40
1.69
15062--15114
23
2.3
23
83
6
63
1
20
49
28
1.60
15062--15114
11
4.6
11
74
6
52
1
20
49
28
1.60

Tables:   1

The End!