Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009415.1 Corchorus capsularis cultivar CVL-1 contig09436, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15618

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80--117
16
2.3
17
90
4
60
0
21
55
23
1.44
594--627
17
2.0
17
94
0
59
50
14
5
29
1.67
786--1216
165
2.6
165
85
5
559
41
15
14
28
1.87
1588--1634
22
2.1
22
100
0
94
29
25
0
44
1.54
2567--2649
2
47.5
2
70
29
66
55
0
1
43
1.07
2564--2668
3
33.3
3
78
16
90
58
0
0
40
1.05
2567--2664
52
1.9
51
89
6
153
57
0
1
41
1.05

Tables:   1

The End!