Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009416.1 Corchorus capsularis cultivar CVL-1 contig09437, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48518

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3866--3927
19
3.3
19
67
24
58
19
0
30
50
1.48
3847--3929
38
2.2
38
100
0
166
20
0
28
50
1.48
22454--22518
33
2.0
33
93
0
112
27
16
12
43
1.84
25028--25075
20
2.3
20
75
3
51
16
10
6
66
1.41
29937--29976
5
7.4
5
89
10
53
25
0
0
75
0.81
31359--31402
16
3.0
14
87
12
54
11
9
18
61
1.55
31489--31529
21
2.0
21
85
9
57
21
12
21
43
1.85
38368--38404
2
19.0
2
88
5
58
45
0
0
54
1.00
40566--40668
51
2.0
51
98
0
197
33
7
28
30
1.85
47184--47213
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!