Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009422.1 Corchorus capsularis cultivar CVL-1 contig09443, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17012

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
491--532
20
2.1
20
86
0
57
64
16
4
14
1.45
5977--6017
2
20.0
2
95
5
73
48
0
2
48
1.14
7589--7637
17
2.9
16
79
11
53
34
18
22
24
1.96
13603--13681
31
2.5
31
82
8
106
35
20
12
31
1.90
16747--16778
2
16.5
2
93
6
57
50
0
0
50
1.00

Tables:   1

The End!