Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009428.1 Corchorus capsularis cultivar CVL-1 contig09449, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28780

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6766--6798
12
2.6
13
85
9
50
0
27
0
72
0.85
10259--10308
4
12.5
4
95
0
64
42
0
8
50
1.32
10428--11512
426
2.5
429
83
5
1293
27
13
16
41
1.86
12055--12116
27
2.5
26
87
10
85
14
30
0
54
1.40
13923--13985
31
2.0
31
85
11
85
23
4
17
53
1.62
15047--15079
16
2.1
16
94
0
57
27
18
36
18
1.94
15935--15981
23
2.0
23
100
0
94
17
40
8
34
1.79
18295--18363
36
1.9
36
90
0
111
28
10
8
52
1.65
27243--27277
11
3.2
11
83
0
52
77
17
2
2
1.02

Tables:   1

The End!