Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000943.1 Corchorus capsularis cultivar CVL-1 contig00943, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3054

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
251--295
21
2.1
21
87
0
63
37
8
37
15
1.79
443--507
23
2.9
22
75
4
58
40
13
12
33
1.82
579--803
22
10.7
22
67
13
91
34
15
8
41
1.78
849--934
34
2.5
34
92
0
136
39
18
8
33
1.80
1038--1136
21
4.5
23
77
16
86
36
13
10
40
1.78
1007--1153
67
2.2
67
83
9
174
33
14
10
41
1.80
916--1311
22
17.9
22
69
13
159
34
16
8
39
1.80
1354--1487
22
6.0
21
74
11
79
40
18
8
32
1.82
2412--2455
23
1.9
22
81
9
52
18
11
11
59
1.61

Tables:   1

The End!