Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009439.1 Corchorus capsularis cultivar CVL-1 contig09460, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11639

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3677--3740
25
2.6
25
100
0
128
21
26
21
29
1.99
4864--4930
20
3.3
20
72
2
71
32
8
26
31
1.87
4903--5033
32
4.1
32
98
1
246
29
9
25
35
1.87
5002--5067
21
3.2
21
65
4
62
31
7
27
33
1.85
5016--5127
20
5.6
20
64
2
62
33
7
26
33
1.84
4998--5131
41
3.3
41
91
2
216
32
6
27
32
1.83
7385--9411
329
6.1
328
78
7
1850
36
15
15
32
1.89
9700--9793
41
2.3
40
85
8
127
30
15
19
34
1.93
10633--10671
17
2.3
17
86
8
53
17
35
12
33
1.88
10695--11195
85
5.9
85
89
1
783
28
31
28
10
1.90
10702--11195
167
2.9
168
92
1
801
28
31
28
10
1.90
10695--11195
252
2.0
254
91
1
808
28
31
28
10
1.90
11512--11630
53
2.2
53
87
0
184
42
13
37
6
1.71
11602--11639
2
19.0
2
100
0
76
50
0
50
0
1.00

Tables:   1

The End!