Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009445.1 Corchorus capsularis cultivar CVL-1 contig09466, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28792

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
332--366
2
17.5
2
100
0
70
48
0
0
51
1.00
1315--1393
39
2.0
39
95
0
140
39
10
17
32
1.83
3427--3486
21
2.9
22
71
16
65
40
10
18
31
1.84
6953--6978
2
13.0
2
100
0
52
50
0
0
50
1.00
16072--16146
29
2.5
31
76
6
82
24
30
13
32
1.93
21001--21033
17
1.9
17
93
0
57
9
36
42
12
1.74

Tables:   1

The End!