Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009446.1 Corchorus capsularis cultivar CVL-1 contig09467, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44257

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3656--3685
13
2.3
13
94
0
51
33
20
13
33
1.91
6327--6411
29
2.9
29
77
13
84
21
18
15
44
1.86
9146--9170
13
1.9
13
100
0
50
32
32
4
32
1.76
16022--16084
30
2.1
30
96
0
117
26
31
26
14
1.95
16154--16202
21
2.3
21
75
6
55
28
28
16
26
1.97
30842--30894
19
2.8
19
77
11
56
1
1
16
79
0.92
30847--30897
22
2.3
21
83
12
59
1
1
17
78
0.94
33149--33182
18
1.9
17
88
5
50
44
14
8
32
1.76

Tables:   1

The End!