Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009448.1 Corchorus capsularis cultivar CVL-1 contig09469, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15893

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31--89
26
2.4
23
78
13
73
32
6
8
52
1.58
1939--1982
20
2.1
21
83
4
54
15
6
18
59
1.58
2059--2097
21
1.9
19
85
10
51
25
10
20
43
1.83
3652--3687
19
1.9
18
88
5
54
41
2
22
33
1.68
5009--5044
18
2.1
18
94
5
65
30
16
8
44
1.77
6012--6218
87
2.4
87
78
6
222
36
24
7
30
1.84

Tables:   1

The End!