Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009450.1 Corchorus capsularis cultivar CVL-1 contig09471, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42016

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1530--1849
48
6.7
47
89
3
417
23
30
15
29
1.96
1531--1849
143
2.2
144
86
2
444
23
31
15
29
1.96
6197--6319
50
2.5
50
97
0
228
29
27
5
37
1.80
22031--22059
2
14.5
2
100
0
58
48
0
0
51
1.00
22497--22857
105
3.5
105
89
6
542
39
9
9
41
1.69
24085--24131
20
2.3
21
81
7
60
55
17
4
23
1.59
35964--36069
39
2.7
38
88
8
151
46
28
7
17
1.76
39052--39121
29
2.4
29
85
2
86
38
28
12
20
1.89

Tables:   1

The End!