Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009466.1 Corchorus capsularis cultivar CVL-1 contig09487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57849

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8769--8836
23
3.0
23
86
2
102
13
38
20
27
1.90
13770--13814
23
1.9
24
82
13
58
33
11
8
46
1.70
17259--17290
5
6.6
5
92
7
57
81
18
0
0
0.70
17735--17861
63
2.0
63
98
0
245
33
12
14
38
1.85
19913--19938
2
13.0
2
100
0
52
50
0
0
50
1.00
20999--21069
35
2.0
35
100
0
142
49
11
14
25
1.76
21004--21078
35
2.1
35
92
0
123
53
10
12
24
1.69
45035--45068
12
3.1
11
91
8
52
0
17
0
82
0.67
46752--46908
73
2.1
74
90
2
244
43
9
26
20
1.82
49607--49631
2
12.5
2
100
0
50
52
0
0
48
1.00
49856--50777
489
1.9
488
85
2
1267
26
13
18
41
1.87
55116--55228
43
2.7
41
81
6
136
30
13
16
39
1.87
55596--56088
47
10.9
47
84
8
673
38
10
10
40
1.74
55691--55757
35
1.9
35
96
0
125
32
11
11
43
1.78
55596--56088
128
3.7
131
87
9
615
38
10
10
40
1.74

Tables:   1

The End!