Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009476.1 Corchorus capsularis cultivar CVL-1 contig09497, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10039

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
888--914
2
13.5
2
100
0
54
48
0
0
51
1.00
3524--3857
170
2.0
169
93
0
578
40
8
19
31
1.81
6384--6445
33
1.9
33
90
3
99
24
20
30
24
1.99
6903--6933
6
5.3
6
96
3
55
51
12
0
35
1.40
8277--8315
19
2.1
19
90
4
62
30
20
2
46
1.64
8298--8327
11
2.7
11
94
0
51
40
20
0
40
1.52
8268--8327
22
2.9
22
76
19
65
35
18
3
43
1.67

Tables:   1

The End!