Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009477.1 Corchorus capsularis cultivar CVL-1 contig09498, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37009

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112--158
24
2.0
24
95
0
85
17
8
34
40
1.79
421--454
17
2.0
17
100
0
68
52
5
0
41
1.25
614--1097
168
2.9
165
82
4
596
37
16
15
30
1.90
12120--12148
14
2.1
14
100
0
58
41
0
27
31
1.56
16074--16098
2
12.5
2
100
0
50
48
0
0
52
1.00
23589--23806
107
2.0
108
95
0
393
27
21
21
29
1.98
25347--25406
2
30.5
2
76
15
54
48
1
1
48
1.21
26579--26638
25
2.5
25
86
5
79
43
0
20
36
1.52

Tables:   1

The End!