Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009481.1 Corchorus capsularis cultivar CVL-1 contig09502, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7009

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2723--2793
32
2.2
32
84
2
106
56
12
4
26
1.55
3152--3959
434
1.9
430
84
3
1084
43
17
13
26
1.85
4385--4467
22
3.8
22
73
10
80
37
16
12
33
1.86
4563--4767
22
9.5
23
66
12
87
35
13
8
42
1.76
4760--4801
20
2.1
20
86
0
57
23
19
9
47
1.78
4758--4805
20
2.3
21
78
10
53
25
16
8
50
1.73
4911--5075
22
7.6
22
71
6
88
36
13
9
41
1.76
4884--5075
44
4.4
44
76
5
133
35
13
9
41
1.76
5019--5121
22
4.6
23
75
16
92
36
10
12
39
1.78
5196--5508
22
13.9
22
67
12
127
36
17
9
35
1.83
5335--5507
44
3.9
44
79
7
147
37
15
10
35
1.83
5675--5712
19
2.0
20
85
15
53
60
2
7
28
1.38
5763--5997
121
2.0
113
85
7
308
46
7
9
35
1.66

Tables:   1

The End!