Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009484.1 Corchorus capsularis cultivar CVL-1 contig09505, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35088

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3883--3912
15
1.9
16
93
6
53
26
10
10
53
1.66
10428--10475
24
2.0
24
100
0
96
45
25
12
16
1.82
10610--10645
17
2.1
17
90
10
56
2
13
0
83
0.76
10723--10794
33
2.2
33
100
0
144
12
15
29
43
1.83
14228--14257
3
10.0
3
92
0
51
0
30
3
66
1.07
14232--14261
9
3.3
9
95
0
51
0
26
6
66
1.16
17539--17651
56
2.0
56
98
0
217
37
24
10
27
1.88
25202--25230
7
4.3
7
91
8
51
82
17
0
0
0.66
25204--25230
13
2.1
13
100
0
54
85
14
0
0
0.61
33656--33721
31
2.1
31
88
5
98
27
19
6
46
1.73

Tables:   1

The End!