Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009487.1 Corchorus capsularis cultivar CVL-1 contig09508, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4586

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66--121
28
2.0
28
92
0
94
23
16
35
25
1.94
146--237
31
3.0
31
87
9
136
3
19
25
52
1.61
232--672
54
8.2
54
91
1
710
7
31
26
34
1.84
232--672
161
2.8
161
93
0
742
7
31
26
34
1.84
232--672
107
4.1
106
92
1
661
7
31
26
34
1.84
1034--1078
22
2.0
22
100
0
90
13
0
42
44
1.43
1996--4578
323
8.1
323
86
3
3291
33
15
17
33
1.91
1996--4584
645
4.0
644
87
3
3491
33
15
17
33
1.91

Tables:   1

The End!