Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000949.1 Corchorus capsularis cultivar CVL-1 contig00949, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20686

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60--108
22
2.2
22
82
7
55
59
4
6
30
1.41
7448--7487
18
2.2
18
100
0
80
22
17
10
50
1.76
17704--17781
16
4.9
16
67
7
61
30
14
30
24
1.94
17705--17781
32
2.4
32
80
2
93
31
14
29
24
1.94
17683--17801
31
3.8
31
70
14
91
30
15
28
26
1.96
17761--17805
15
2.9
15
83
3
54
31
15
26
26
1.96
17888--18041
53
2.9
53
86
0
200
27
24
9
39
1.85
18114--18555
220
2.0
222
96
0
816
38
15
15
30
1.88

Tables:   1

The End!