Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009492.1 Corchorus capsularis cultivar CVL-1 contig09513, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22456

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2959--3001
12
3.6
12
87
0
50
9
48
0
41
1.35
2966--2999
6
5.7
6
100
0
68
0
52
0
47
1.00
10890--10934
19
2.4
19
80
0
54
64
20
2
13
1.38
11218--11286
33
2.1
32
83
2
84
14
37
36
11
1.83
11282--11388
32
3.3
32
94
1
178
12
26
44
16
1.83
11883--11983
38
2.5
41
87
11
163
49
18
4
26
1.68
12855--12933
6
12.2
6
76
17
61
2
21
44
31
1.66
12859--12902
15
2.8
16
86
3
63
4
18
38
38
1.71
13687--13758
16
4.5
16
79
6
65
2
16
48
31
1.61
13917--14120
102
2.0
102
90
1
320
23
13
14
49
1.78
18686--18763
30
2.6
30
91
4
122
24
15
15
44
1.85
22430--22456
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!