Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009493.1 Corchorus capsularis cultivar CVL-1 contig09514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71581

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6921--6973
26
2.0
26
85
7
72
33
3
18
43
1.68
12511--12552
18
2.3
18
91
0
66
23
42
2
30
1.67
13257--13305
18
2.7
18
72
12
55
12
0
12
75
1.05
14939--14985
22
2.1
22
100
0
94
36
8
19
36
1.82
17013--17047
7
5.0
7
100
0
70
28
0
42
28
1.56
17509--17533
11
2.3
11
100
0
50
56
24
20
0
1.43
24141--24165
13
1.9
13
100
0
50
40
12
0
48
1.40
31417--31450
7
4.9
7
100
0
68
29
11
14
44
1.81
31673--31698
7
3.7
7
100
0
52
42
15
15
26
1.87
38019--38052
6
5.7
6
96
0
59
29
0
35
35
1.58
47305--47329
2
12.5
2
100
0
50
48
0
0
52
1.00
51226--51353
48
2.7
48
86
4
177
34
17
20
28
1.95
52873--52929
28
2.0
28
93
0
96
29
28
29
12
1.93
55874--55899
2
13.0
2
100
0
52
50
0
0
50
1.00
62249--62282
2
17.5
2
93
6
61
50
0
0
50
1.00

Tables:   1

The End!