Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009500.1 Corchorus capsularis cultivar CVL-1 contig09521, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51587

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--31
7
4.4
7
95
0
53
83
3
12
0
0.75
8271--8296
6
4.3
6
100
0
52
38
46
0
15
1.46
9363--9390
2
14.0
2
100
0
56
50
0
0
50
1.00
13401--13583
93
2.0
93
87
0
267
39
10
21
27
1.87
14629--14670
16
2.7
16
92
3
68
26
16
4
52
1.63
23151--23199
24
2.0
24
88
7
73
61
0
0
38
0.96
23147--23199
20
2.8
18
76
15
54
62
0
0
37
0.96
26204--26229
6
4.3
6
100
0
52
50
34
15
0
1.45
29369--29394
7
3.7
7
100
0
52
11
0
0
88
0.52
30532--30561
1
30.0
1
93
0
51
0
0
96
3
0.21
39201--39225
2
12.5
2
100
0
50
48
0
0
52
1.00
50683--50714
1
32.0
1
100
0
64
100
0
0
0
0.00

Tables:   1

The End!