Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009504.1 Corchorus capsularis cultivar CVL-1 contig09525, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22737

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6496--6524
3
9.7
3
100
0
58
34
0
0
65
0.93
7083--7108
3
8.7
3
100
0
52
34
0
0
65
0.93
11868--11905
11
3.5
11
85
10
51
57
2
0
39
1.12
12218--12301
41
2.0
42
97
2
161
46
7
4
41
1.52
12905--12935
12
2.7
12
95
5
55
35
29
22
12
1.91
13076--13119
15
3.0
14
80
9
52
6
15
0
77
0.97
17485--17557
8
8.6
8
86
11
101
39
21
0
38
1.54
17485--17557
18
4.3
16
85
13
101
39
21
0
38
1.54
17485--17557
26
2.8
26
97
0
137
39
21
0
38
1.54
18226--18264
20
2.0
20
100
0
78
23
0
56
20
1.42
17883--18463
293
2.0
293
96
0
1081
24
12
26
36
1.92
18975--19271
148
2.0
149
98
0
578
26
11
17
43
1.84

Tables:   1

The End!