Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009509.1 Corchorus capsularis cultivar CVL-1 contig09530, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19737

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
352--648
110
2.6
110
91
5
454
37
11
1
49
1.48
2700--2768
33
2.1
32
89
2
102
17
28
36
17
1.93
2846--2889
21
2.1
21
91
0
70
34
6
34
25
1.82
4320--4379
30
2.0
30
87
6
86
43
5
16
35
1.70
10212--10270
30
2.0
30
86
6
84
30
16
28
23
1.97
13887--13916
2
15.0
2
100
0
60
50
0
0
50
1.00
15121--15153
3
11.0
3
100
0
66
66
0
0
33
0.92
16635--16698
27
2.3
27
97
2
119
6
31
7
54
1.54

Tables:   1

The End!