Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009512.1 Corchorus capsularis cultivar CVL-1 contig09533, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35900

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10121--10146
2
13.0
2
100
0
52
50
0
0
50
1.00
15813--15837
12
2.1
12
100
0
50
76
8
16
0
1.02
17529--17553
2
12.5
2
100
0
50
0
48
0
52
1.00
19482--19507
1
26.0
1
100
0
52
100
0
0
0
0.00
29770--29808
12
3.6
12
80
19
50
25
28
15
30
1.96
30936--31029
13
7.5
13
89
5
149
24
25
15
34
1.95
30936--31029
38
2.5
38
91
3
122
24
25
15
34
1.95
30936--31024
25
3.5
25
96
1
160
23
25
15
34
1.95

Tables:   1

The End!